Quantum mechanical scoring for protein docking.
Cho AE, Chung JY, Kim M, Park K, J Chem Phys, 2009 Oct 7 - link

Correlation between performance of QM/MM docking and simple classification of binding sites.
Chung JY, Hah JM, Cho AE, J Chem Inf Model, 2009 Oct - link

Extension of QM/MM docking and its applications to metalloproteins.
Cho AE, Rinaldo D, J Comput Chem, 2009 Dec - link

Importance of accurate charges in molecular docking: quantum mechanical/molecular mechanical (QM/MM) approach.
Cho AE, Guallar V, Berne BJ, Friesner R, J Comput Chem, 2005 Jul 15 - link

The MPSim-Dock hierarchical docking algorithm: application to the eight trypsin inhibitor cocrystals.
Cho AE, Wendel JA, Vaidehi N, Kekenes-Huskey PM, Floriano WB, Maiti PK, Goddard WA 3rd, J Comput Chem, 2005 Jan 15 - link