Soft docking and multiple receptor conformations in virtual screening.
Ferrari AM, Wei BQ, Costantino L, Shoichet BK, J Med Chem, 2004 Oct 7 - link

Testing a flexible-receptor docking algorithm in a model binding site.
Wei BQ, Weaver LH, Ferrari AM, Matthews BW, Shoichet BK, J Mol Biol, 2004 Apr 9 - link

Docking and database screening reveal new classes of Plasmodium falciparum dihydrofolate reductase inhibitors.
Rastelli G, Pacchioni S, Sirawaraporn W, Sirawaraporn R, Parenti MD, Ferrari AM, J Med Chem, 2003 Jul 3 - link

Discovery of new inhibitors of aldose reductase from molecular docking and database screening.
Rastelli G, Ferrari AM, Costantino L, Gamberini MC, Bioorg Med Chem, 2002 May - link