A method for induced-fit docking, scoring, and ranking of flexible ligands. Application to peptidic and pseudopeptidic beta-secretase (BACE 1) inhibitors.
Moitessier N, Therrien E, Hanessian S, J Med Chem, 2006 Oct 5 - link

Docking of aminoglycosides to hydrated and flexible RNA.
Moitessier N, Westhof E, Hanessian S, J Med Chem, 2006 Feb 9 - link

A comparative docking study and the design of potentially selective MMP inhibitors.
Hanessian S, Moitessier N, Therrien E, J Comput Aided Mol Des, 2001 Oct - link