Protein-protein docking: progress in CAPRI rounds 6-12 using a combination of methods: the introduction of steered solvated molecular dynamics.
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Effect of local shape modifications of molecular surfaces on rigid-body protein-protein docking.
Heifetz A, Eisenstein M, Protein Eng, 2003 Mar - link

Electrostatics in protein-protein docking.
Heifetz A, Katchalski-Katzir E, Eisenstein M, Protein Sci, 2002 Mar - link