Automated docking screens: a feasibility study.
Irwin JJ, Shoichet BK, Mysinger MM, Huang N, Colizzi F, Wassam P, Cao Y, J Med Chem, 2009 Sep 24 - link

Exploiting ordered waters in molecular docking.
Huang N, Shoichet BK, J Med Chem, 2008 Aug 28 - link

Benchmarking sets for molecular docking.
Huang N, Shoichet BK, Irwin JJ, J Med Chem, 2006 Nov 16 - link