Docking flexible peptide to flexible protein by molecular dynamics using two implicit-solvent models: an evaluation in protein kinase and phosphatase systems.
Huang Z, Wong CF, J Phys Chem B, 2009 Oct 29 - link

Conformational selection of protein kinase A revealed by flexible-ligand flexible-protein docking.
Huang Z, Wong CF, J Comput Chem, 2009 Mar - link

Flexible protein-flexible ligand docking with disrupted velocity simulated annealing.
Huang Z, Wong CF, Wheeler RA, Proteins, 2008 Apr - link

A mining minima approach to exploring the docking pathways of p-nitrocatechol sulfate to YopH.
Huang Z, Wong CF, Biophys J, 2007 Dec 15 - link