Rescoring docking hit lists for model cavity sites: predictions and experimental testing.
Graves AP, Shivakumar DM, Boyce SE, Jacobson MP, Case DA, Shoichet BK, J Mol Biol, 2008 Mar 28 - link

Virtual ligand screening against Escherichia coli dihydrofolate reductase: improving docking enrichment using physics-based methods.
Bernacki K, Kalyanaraman C, Jacobson MP, J Biomol Screen, 2005 Oct - link