Refining near-native protein-protein docking decoys by local resampling and energy minimization.
Liang S, Wang G, Zhou Y, Proteins, 2009 Aug 1 - link

Consensus scoring for enriching near-native structures from protein-protein docking decoys.
Liang S, Meroueh SO, Wang G, Qiu C, Zhou Y, Proteins, 2009 May 1 - link

A simple reference state makes a significant improvement in near-native selections from structurally refined docking decoys.
Liang S, Liu S, Zhang C, Zhou Y, Proteins, 2007 Nov 1 - link