AutoDock4 and AutoDockTools4: Automated docking with selective receptor flexibility.
Morris GM, Huey R, Lindstrom W, Sanner MF, Belew RK, Goodsell DS, Olson AJ, J Comput Chem, 2009 Dec - link

Using AutoDock for ligand-receptor docking.
Morris GM, Huey R, Olson AJ, Curr Protoc Bioinformatics, 2008 Dec - link

Assessing the role of polarization in docking.
Illingworth CJ, Morris GM, Parkes KE, Snell CR, Reynolds CA, J Phys Chem A, 2008 Nov 27 - link

Molecular docking.
Morris GM, Lim-Wilby M, Methods Mol Biol, 2008 - link

Automated docking of ligands to an artificial active site: augmenting crystallographic analysis with computer modeling.
Rosenfeld RJ, Goodsell DS, Musah RA, Morris GM, Goodin DB, Olson AJ, J Comput Aided Mol Des, 2003 Aug - link

Automated docking to multiple target structures: incorporation of protein mobility and structural water heterogeneity in AutoDock.
Osterberg F, Morris GM, Sanner MF, Olson AJ, Goodsell DS, Proteins, 2002 Jan 1 - link

Distributed automated docking of flexible ligands to proteins: parallel applications of AutoDock 2.4.
Morris GM, Goodsell DS, Huey R, Olson AJ, J Comput Aided Mol Des, 1996 Aug - link

Automated docking of flexible ligands: applications of AutoDock.
Goodsell DS, Morris GM, Olson AJ, J Mol Recognit, 1996 Jan-Feb - link