A molecular docking study of estrogenically active compounds with 1,2-diarylethane and 1,2-diarylethene pharmacophores.
Kekenes-Huskey PM, Muegge I, von Rauch M, Gust R, Knapp EW, Bioorg Med Chem, 2004 Dec 15 - link

Evaluation of docking/scoring approaches: a comparative study based on MMP3 inhibitors.
Ha S, Andreani R, Robbins A, Muegge I, J Comput Aided Mol Des, 2000 Jul - link

Evaluation of PMF scoring in docking weak ligands to the FK506 binding protein.
Muegge I, Martin YC, Hajduk PJ, Fesik SW, J Med Chem, 1999 Jul 15 - link