Principles of flexible protein-protein docking.
Andrusier N, Mashiach E, Nussinov R, Wolfson HJ, Proteins, 2008 Nov 1 - link

FireDock: a web server for fast interaction refinement in molecular docking.
Mashiach E, Schneidman-Duhovny D, Andrusier N, Nussinov R, Wolfson HJ, Nucleic Acids Res, 2008 Jul 1 - link

FireDock: fast interaction refinement in molecular docking.
Andrusier N, Nussinov R, Wolfson HJ, Proteins, 2007 Oct 1 - link

Combinatorial docking approach for structure prediction of large proteins and multi-molecular assemblies.
Inbar Y, Benyamini H, Nussinov R, Wolfson HJ, Phys Biol, 2005 Nov 9 - link

Fibril modelling by sequence and structure conservation analysis combined with protein docking techniques: beta(2)-microglobulin amyloidosis.
Benyamini H, Gunasekaran K, Wolfson H, Nussinov R, Biochim Biophys Acta, 2005 Nov 10 - link

Geometry-based flexible and symmetric protein docking.
Schneidman-Duhovny D, Inbar Y, Nussinov R, Wolfson HJ, Proteins, 2005 Aug 1 - link

Approaching the CAPRI challenge with an efficient geometry-based docking.
Inbar Y, Schneidman-Duhovny D, Halperin I, Oron A, Nussinov R, Wolfson HJ, Proteins, 2005 Aug 1 - link

PatchDock and SymmDock: servers for rigid and symmetric docking.
Schneidman-Duhovny D, Inbar Y, Nussinov R, Wolfson HJ, Nucleic Acids Res, 2005 Jul 1 - link

Prediction of multimolecular assemblies by multiple docking.
Inbar Y, Benyamini H, Nussinov R, Wolfson HJ, J Mol Biol, 2005 Jun 3 - link

Protein-protein interactions: hot spots and structurally conserved residues often locate in complemented pockets that pre-organized in the unbound states: implications for docking.
Li X, Keskin O, Ma B, Nussinov R, Liang J, J Mol Biol, 2004 Nov 26 - link

Protein-protein interactions; coupling of structurally conserved residues and of hot spots across interfaces. Implications for docking.
Halperin I, Wolfson H, Nussinov R, Structure, 2004 Jun - link

Predicting molecular interactions in silico: II. Protein-protein and protein-drug docking.
Schneidman-Duhovny D, Nussinov R, Wolfson HJ, Curr Med Chem, 2004 Jan - link

Beta2-microglobulin amyloidosis: insights from conservation analysis and fibril modelling by protein docking techniques.
Benyamini H, Gunasekaran K, Wolfson H, Nussinov R, J Mol Biol, 2003 Jun 27 - link

Taking geometry to its edge: fast unbound rigid (and hinge-bent) docking.
Schneidman-Duhovny D, Inbar Y, Polak V, Shatsky M, Halperin I, Benyamini H, Barzilai A, Dror O, Haspel N, Nussinov R, Wolfson HJ, Proteins, 2003 Jul 1 - link

Principles of docking: An overview of search algorithms and a guide to scoring functions.
Halperin I, Ma B, Wolfson H, Nussinov R, Proteins, 2002 Jun 1 - link

Geometrical docking algorithms. A practical approach.
Wolfson HJ, Nussinov R, Methods Mol Biol, 2000 - link

Efficient computational algorithms for docking and for generating and matching a library of functional epitopes II. Computer vision-based techniques for the generation and utilization of functional epitopes.
Nussinov R, Wolfson HJ, Comb Chem High Throughput Screen, 1999 Oct - link

Efficient computational algorithms for docking and for generating and matching a library of functional epitopes I. Rigid and flexible hinge-bending docking algorithms.
Nussinov R, Wolfson HJ, Comb Chem High Throughput Screen, 1999 Oct - link

Examination of shape complementarity in docking of unbound proteins.
Norel R, Petrey D, Wolfson HJ, Nussinov R, Proteins, 1999 Aug 15 - link

A method for biomolecular structural recognition and docking allowing conformational flexibility.
Sandak B, Nussinov R, Wolfson HJ, J Comput Biol, 1998 Winter - link

Flexible docking allowing induced fit in proteins: insights from an open to closed conformational isomers.
Sandak B, Wolfson HJ, Nussinov R, Proteins, 1998 Aug 1 - link

A set of van der Waals and coulombic radii of protein atoms for molecular and solvent-accessible surface calculation, packing evaluation, and docking.
Li AJ, Nussinov R, Proteins, 1998 Jul 1 - link

Investigation of the enzymatic mechanism of the yeast chorismate mutase by docking a transition state analog.
Lin SL, Xu D, Li A, Rosen M, Wolfson HJ, Nussinov R, J Mol Biol, 1997 Sep 5 - link

Molecular surface complementarity at protein-protein interfaces: the critical role played by surface normals at well placed, sparse, points in docking.
Norel R, Lin SL, Wolfson HJ, Nussinov R, J Mol Biol, 1995 Sep 15 - link

A geometry-based suite of molecular docking processes.
Fischer D, Lin SL, Wolfson HL, Nussinov R, J Mol Biol, 1995 Apr 28 - link

An automated computer vision and robotics-based technique for 3-D flexible biomolecular docking and matching.
Sandak B, Nussinov R, Wolfson HJ, Comput Appl Biosci, 1995 Feb - link