Pursuing aldose reductase inhibitors through in situ cross-docking and similarity-based virtual screening.
Cosconati S, Marinelli L, La Motta C, Sartini S, Da Settimo F, Olson AJ, Novellino E, J Med Chem, 2009 Sep 24 - link

AutoDock Vina: Improving the speed and accuracy of docking with a new scoring function, efficient optimization, and multithreading.
Trott O, Olson AJ, J Comput Chem, 2009 Jun 4 - link

AutoDock4 and AutoDockTools4: Automated docking with selective receptor flexibility.
Morris GM, Huey R, Lindstrom W, Sanner MF, Belew RK, Goodsell DS, Olson AJ, J Comput Chem, 2009 Dec - link

Using AutoDock for ligand-receptor docking.
Morris GM, Huey R, Olson AJ, Curr Protoc Bioinformatics, 2008 Dec - link

Empirical entropic contributions in computational docking: evaluation in APS reductase complexes.
Chang MW, Belew RK, Carroll KS, Olson AJ, Goodsell DS, J Comput Chem, 2008 Aug - link

Analysis of HIV wild-type and mutant structures via in silico docking against diverse ligand libraries.
Chang MW, Lindstrom W, Olson AJ, Belew RK, J Chem Inf Model, 2007 May-Jun - link

Automated docking of ligands to an artificial active site: augmenting crystallographic analysis with computer modeling.
Rosenfeld RJ, Goodsell DS, Musah RA, Morris GM, Goodin DB, Olson AJ, J Comput Aided Mol Des, 2003 Aug - link

The tissue factor/factor VIIa/factor Xa complex: a model built by docking and site-directed mutagenesis.
Norledge BV, Petrovan RJ, Ruf W, Olson AJ, Proteins, 2003 Nov 15 - link

Selective attenuation of the extrinsic limb of the tissue factor-driven coagulation protease cascade by occupancy of a novel peptidyl docking site on tissue factor.
Huang H, Norledge BV, Liu C, Olson AJ, Edgington TS, Biochemistry, 2003 Sep 16 - link

Automated docking to multiple target structures: incorporation of protein mobility and structural water heterogeneity in AutoDock.
Osterberg F, Morris GM, Sanner MF, Olson AJ, Goodsell DS, Proteins, 2002 Jan 1 - link

Identification and analysis of the acyl carrier protein (ACP) docking site on beta-ketoacyl-ACP synthase III.
Zhang YM, Rao MS, Heath RJ, Price AC, Olson AJ, Rock CO, White SW, J Biol Chem, 2001 Mar 16 - link

Ionization state and molecular docking studies for the macrophage migration inhibitory factor: the role of lysine 32 in the catalytic mechanism.
Soares T, Goodsell D, Ferreira R, Olson AJ, Briggs JM, J Mol Recognit, 2000 May-Jun - link

Docking of 4-oxalocrotonate tautomerase substrates: implications for the catalytic mechanism.
Soares TA, Goodsell DS, Briggs JM, Ferreira R, Olson AJ, Biopolymers, 1999 Sep - link

Modelling of factor Xa-inhibitor complexes: a computational flexible docking approach.
Rao MS, Olson AJ, Proteins, 1999 Feb 1 - link

Automated docking and the search for HIV protease inhibitors.
Olson AJ, Goodsell DS, SAR QSAR Environ Res, 1998 - link

Distributed automated docking of flexible ligands to proteins: parallel applications of AutoDock 2.4.
Morris GM, Goodsell DS, Huey R, Olson AJ, J Comput Aided Mol Des, 1996 Aug - link

Automated docking of flexible ligands: applications of AutoDock.
Goodsell DS, Morris GM, Olson AJ, J Mol Recognit, 1996 Jan-Feb - link

Automated docking in crystallography: analysis of the substrates of aconitase.
Goodsell DS, Lauble H, Stout CD, Olson AJ, Proteins, 1993 Sep - link

Automated docking of substrates to proteins by simulated annealing.
Goodsell DS, Olson AJ, Proteins, 1990 - link