A fast protein-ligand docking algorithm based on hydrogen bond matching and surface shape complementarity.
Luo W, Pei J, Zhu Y, J Mol Model, 2009 Oct 13 - link

Discovery of multitarget inhibitors by combining molecular docking with common pharmacophore matching.
Wei D, Jiang X, Zhou L, Chen J, Chen Z, He C, Yang K, Liu Y, Pei J, Lai L, J Med Chem, 2008 Dec 25 - link

PSI-DOCK: towards highly efficient and accurate flexible ligand docking.
Pei J, Wang Q, Liu Z, Li Q, Yang K, Lai L, Proteins, 2006 Mar 1 - link