Q-Dock: Low-resolution flexible ligand docking with pocket-specific threading restraints.
Brylinski M, Skolnick J, J Comput Chem, 2008 Jul 30 - link

A scoring function for docking ligands to low-resolution protein structures.
Bindewald E, Skolnick J, J Comput Chem, 2005 Mar - link

Docking of small ligands to low-resolution and theoretically predicted receptor structures.
Wojciechowski M, Skolnick J, J Comput Chem, 2002 Jan 15 - link