Dinucleotides docking to scorpion polypeptide toxins: a molecular modeling method for protein functional site recognition.
Zhu J, Wang J, Cheng MS, Zhang JH, Biochem Biophys Res Commun, 2009 Jan 9 - link

Prediction of the binding modes between BB-83698 and peptide deformylase from Bacillus stearothermophilus by docking and molecular dynamics simulation.
Wang Q, Wang J, Cai Z, Xu W, Biophys Chem, 2008 May - link

Docking studies of Nickel-Peptide deformylase (PDF) inhibitors: exploring the new binding pockets.
Wang Q, Zhang D, Wang J, Cai Z, Xu W, Biophys Chem, 2006 Jun 20 - link

Hierarchical database screenings for HIV-1 reverse transcriptase using a pharmacophore model, rigid docking, solvation docking, and MM-PB/SA.
Wang J, Kang X, Kuntz ID, Kollman PA, J Med Chem, 2005 Apr 7 - link

Use of MM-PBSA in reproducing the binding free energies to HIV-1 RT of TIBO derivatives and predicting the binding mode to HIV-1 RT of efavirenz by docking and MM-PBSA.
Wang J, Morin P, Wang W, Kollman PA, J Am Chem Soc, 2001 Jun 6 - link

Automated docking of peptides and proteins by using a genetic algorithm combined with a tabu search.
Hou T, Wang J, Chen L, Xu X, Protein Eng, 1999 Aug - link

Flexible ligand docking: a multistep strategy approach.
Wang J, Kollman PA, Kuntz ID, Proteins, 1999 Jul 1 - link